Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution.

Shih AC, Hsiao TC, Ho MS, Li WH

Phylo-mLogo: an interactive and hierarchical multiple-logo visualization tool for alignment of many sequences.

Shih AC, Lee DT, Peng CL, Wu YW

SinicView: a visualization environment for comparisons of multiple nucleotide sequence alignment tools.

Shih AC, Lee DT, Lin L, Peng CL, Chen SH, Wu YW, Wong CY, Chou MY, Shiao TC, Hsieh MF

GS-Aligner: a novel tool for aligning genomic sequences using bit-level operations.

Shih AC, Li WH

A new iterated two-band diffusion equation: theory and its application.

Shih AC, Liao HY, Lu CS